Homology
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CLANS v.2
CLANS is a small tool written in Java for cluster analysis of sequences. Frequently, homology is used as a reason to transfer knowledge about function or structure from known to unknown proteins.
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SeqVerter v.2.0.4.3
SeqVerter is a free sequence file format conversion utility by GeneStudio, Inc. SeqVerter encapsulates a small subset of the features offered by the GeneStudio™ Pro suite of programs.
NJPlot v.2.3
Create phylogenetic trees with this tool. NJplot is a tree drawing software able to draw any phylogenetic tree expressed in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP package).
Unrooted v.1.0
Unrooted is a tree drawing software able to draw any binary tree expressed in the standard phylogenetic tree format (e.g., the format used by the PHYLIP package). Trees are drawn in an unrooted way, that is, using a circular shape,
WPDB Database Loader v.2.0
The Protein Data Bank Through Microsoft Windows. Analyze 3D structure of biological macromolecules fast and easy.
TESD (Transposable Element Simulator Dynamics) v.1.0
TESD (Transposable Element Simulator Dynamics) is a scientific software developed by the Laboratoire de Biom trie et Biologie Evolutive,
MB DNA Analysis v.6.84
MB is a FREE software for DNA analysis. MB stands for MolecularBiological DNA Analysis. MB is a free Windows DNA analysis program. On other systems (Linux, Macintosh) it is possible to emulate the program.
CHSMiner v.1.1
Detect CHSs with this tool. CHSMiner offer you an integrated GUI environment to help you with the detection, evaluation and visualization of chromosomal homologous segments (CHSs). CHSMiner Features: * Define CHSs based on shared gene content alone
PanOCT v.1.6
PanOCT, Pan-genome Ortholog Clustering Tool, is a program written in PERL for pan-genomic analysis of closely related prokaryotic species or strains.
Prospect Interface v.1.04
Bio::Prospect:: is a Perl API to thePROSPECT threading application.
T2prhd v.2.0
t2prhd is a Perl script which generates simple diagrams that highlight relationships of sequence repeats detected by using a profile HMM in two sequences.